Real-time genomic surveillance for sars-cov-2 variants of concern, uruguay

Natalia Rego; Alicia Costábile; Mercedes Paz; Cecilia Salazar; Paula Perbolianachis; Lucía Spangenberg; Ignacio Ferrés; Rodrigo Arce; Alvaro Fajardo; Mailen Arleo; Tania Possi; Natalia Reyes; Ma Noel Bentancor; Andrés Lizasoain; María José Benítez; Viviana Bortagaray; Ana Moller; Gonzalo Bello; Ighor Arantes; Mariana Brandes; Pablo Smircich; Odhille Chappos; Melissa Duquía; Belén González; Luciana Griffero; Mauricio Méndez; Ma Pía Techera; Juan Zanetti; Bernardina Rivera; Matías Maidana; Martina Alonso; Cecilia Alonso; Julio Medina; Henry Albornoz; Rodney Colina; Veronica Noya; Gregorio Iraola; Tamara Fernández-Calero; Gonzalo Moratorio; Pilar Moreno

doi:10.3201/eid2711.211198

Real-time genomic surveillance for sars-cov-2 variants of concern, uruguay

Natalia Rego
, Alicia Costábile
, Mercedes Paz
, Cecilia Salazar
, Paula Perbolianachis
, Lucía Spangenberg
, Ignacio Ferrés
, Rodrigo Arce
, Alvaro Fajardo
, Mailen Arleo
, Tania Possi
, Natalia Reyes
, Ma Noel Bentancor
, Andrés Lizasoain
, María José Benítez
, Viviana Bortagaray
, Ana Moller
, Gonzalo Bello
, Ighor Arantes
, Mariana Brandes

Pablo Smircich, Odhille Chappos, Melissa Duquía, Belén González, Luciana Griffero, Mauricio Méndez, Ma Pía Techera, Juan Zanetti, Bernardina Rivera, Matías Maidana, Martina Alonso, Cecilia Alonso, Julio Medina, Henry Albornoz, Rodney Colina, Veronica Noya, Gregorio Iraola, Tamara Fernández-Calero, Gonzalo Moratorio, Pilar Moreno

Research output: Contribution to journal › Article › peer-review

10 Scopus citations

Abstract

We developed a genomic surveillance program for realtime monitoring of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern (VOCs) in Uruguay. We report on a PCR method for SARSCoV- 2 VOCs, the surveillance workflow, and multiple independent introductions and community transmission of the SARS-CoV-2 P.1 VOC in Uruguay.

Original language	English
Pages (from-to)	2957-2960
Number of pages	4
Journal	Emerging Infectious Diseases
Volume	27
Issue number	11
DOIs	https://doi.org/10.3201/eid2711.211198
State	Published - Nov 2021
Externally published	Yes

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 3 Good Health and Well-being

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10.3201/eid2711.211198

Cite this

Rego, N., Costábile, A., Paz, M., Salazar, C., Perbolianachis, P., Spangenberg, L., Ferrés, I., Arce, R., Fajardo, A., Arleo, M., Possi, T., Reyes, N., Bentancor, M. N., Lizasoain, A., Benítez, M. J., Bortagaray, V., Moller, A., Bello, G., Arantes, I., ... Moreno, P. (2021). Real-time genomic surveillance for sars-cov-2 variants of concern, uruguay. Emerging Infectious Diseases, 27(11), 2957-2960. https://doi.org/10.3201/eid2711.211198

@article{6cfff70d076647ccaa6f0a45c4477390,

title = "Real-time genomic surveillance for sars-cov-2 variants of concern, uruguay",

abstract = "We developed a genomic surveillance program for realtime monitoring of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern (VOCs) in Uruguay. We report on a PCR method for SARSCoV- 2 VOCs, the surveillance workflow, and multiple independent introductions and community transmission of the SARS-CoV-2 P.1 VOC in Uruguay.",

author = "Natalia Rego and Alicia Cost{\'a}bile and Mercedes Paz and Cecilia Salazar and Paula Perbolianachis and Luc{\'i}a Spangenberg and Ignacio Ferr{\'e}s and Rodrigo Arce and Alvaro Fajardo and Mailen Arleo and Tania Possi and Natalia Reyes and Bentancor, \{Ma Noel\} and Andr{\'e}s Lizasoain and Ben{\'i}tez, \{Mar{\'i}a Jos{\'e}\} and Viviana Bortagaray and Ana Moller and Gonzalo Bello and Ighor Arantes and Mariana Brandes and Pablo Smircich and Odhille Chappos and Melissa Duqu{\'i}a and Bel{\'e}n Gonz{\'a}lez and Luciana Griffero and Mauricio M{\'e}ndez and Techera, \{Ma P{\'i}a\} and Juan Zanetti and Bernardina Rivera and Mat{\'i}as Maidana and Martina Alonso and Cecilia Alonso and Julio Medina and Henry Albornoz and Rodney Colina and Veronica Noya and Gregorio Iraola and Tamara Fern{\'a}ndez-Calero and Gonzalo Moratorio and Pilar Moreno",

year = "2021",

month = nov,

doi = "10.3201/eid2711.211198",

language = "Ingl{\'e}s",

volume = "27",

pages = "2957--2960",

journal = "Emerging Infectious Diseases",

issn = "1080-6040",

publisher = "Centers for Disease Control and Prevention (CDC)",

number = "11",

}

Rego, N, Costábile, A, Paz, M, Salazar, C, Perbolianachis, P, Spangenberg, L, Ferrés, I, Arce, R, Fajardo, A, Arleo, M, Possi, T, Reyes, N, Bentancor, MN, Lizasoain, A, Benítez, MJ, Bortagaray, V, Moller, A, Bello, G, Arantes, I, Brandes, M, Smircich, P, Chappos, O, Duquía, M, González, B, Griffero, L, Méndez, M, Techera, MP, Zanetti, J, Rivera, B, Maidana, M, Alonso, M, Alonso, C, Medina, J, Albornoz, H, Colina, R, Noya, V, Iraola, G, Fernández-Calero, T, Moratorio, G & Moreno, P 2021, 'Real-time genomic surveillance for sars-cov-2 variants of concern, uruguay', Emerging Infectious Diseases, vol. 27, no. 11, pp. 2957-2960. https://doi.org/10.3201/eid2711.211198

TY - JOUR

T1 - Real-time genomic surveillance for sars-cov-2 variants of concern, uruguay

AU - Rego, Natalia

AU - Costábile, Alicia

AU - Paz, Mercedes

AU - Salazar, Cecilia

AU - Perbolianachis, Paula

AU - Spangenberg, Lucía

AU - Ferrés, Ignacio

AU - Arce, Rodrigo

AU - Fajardo, Alvaro

AU - Arleo, Mailen

AU - Possi, Tania

AU - Reyes, Natalia

AU - Bentancor, Ma Noel

AU - Lizasoain, Andrés

AU - Benítez, María José

AU - Bortagaray, Viviana

AU - Moller, Ana

AU - Bello, Gonzalo

AU - Arantes, Ighor

AU - Brandes, Mariana

AU - Smircich, Pablo

AU - Chappos, Odhille

AU - Duquía, Melissa

AU - González, Belén

AU - Griffero, Luciana

AU - Méndez, Mauricio

AU - Techera, Ma Pía

AU - Zanetti, Juan

AU - Rivera, Bernardina

AU - Maidana, Matías

AU - Alonso, Martina

AU - Alonso, Cecilia

AU - Medina, Julio

AU - Albornoz, Henry

AU - Colina, Rodney

AU - Noya, Veronica

AU - Iraola, Gregorio

AU - Fernández-Calero, Tamara

AU - Moratorio, Gonzalo

AU - Moreno, Pilar

PY - 2021/11

Y1 - 2021/11

N2 - We developed a genomic surveillance program for realtime monitoring of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern (VOCs) in Uruguay. We report on a PCR method for SARSCoV- 2 VOCs, the surveillance workflow, and multiple independent introductions and community transmission of the SARS-CoV-2 P.1 VOC in Uruguay.

AB - We developed a genomic surveillance program for realtime monitoring of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern (VOCs) in Uruguay. We report on a PCR method for SARSCoV- 2 VOCs, the surveillance workflow, and multiple independent introductions and community transmission of the SARS-CoV-2 P.1 VOC in Uruguay.

UR - https://www.scopus.com/pages/publications/85114921485

U2 - 10.3201/eid2711.211198

DO - 10.3201/eid2711.211198

M3 - Artículo

C2 - 34437831

AN - SCOPUS:85114921485

SN - 1080-6040

VL - 27

SP - 2957

EP - 2960

JO - Emerging Infectious Diseases

JF - Emerging Infectious Diseases

IS - 11

ER -

Real-time genomic surveillance for sars-cov-2 variants of concern, uruguay

Abstract

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