A Preliminary Comparison of P-Tool Consistency

Javier Murillo, Flavio Spetale, Elizabeth Tapia, Flavia Krsticevic, Olivier Cailloux, Serge Guillaume, Gustavo Vazquez, Tamara Fernandez, Sebastien Destercke, Sergio Ponce, Pilar Bulacio

Producción científica: Capítulo del libro/informe/acta de congresoContribución a la conferenciarevisión exhaustiva

Resumen

Many Bioinformatics tools, known as p-tools, have been developed to predict the effect of single nucleotide polymorphisms (SNPs) on gene functionality, in an effort to reduce the need for in-vivo assays. However, the large number of p-tools available and the heterogeneity of their output make their selection and comparison difficult. To study the consistency of predictions across p-tools, here we present two indices and test them on five p-tools whose predictions are based on different types of background information. For this test, SNPs from well-known organism Drosophila melanogaster are considered.

Idioma originalInglés
Título de la publicación alojada8th Latin American Conference on Biomedical Engineering and 42nd National Conference on Biomedical Engineering - Proceedings of CLAIB-CNIB 2019
EditoresCésar A. González Díaz, Christian Chapa González, Eric Laciar Leber, Hugo A. Vélez, Norma P. Puente, Dora-Luz Flores, Adriano O. Andrade, Héctor A. Galván, Fabiola Martínez, Renato García, Citlalli J. Trujillo, Aldo R. Mejía
EditorialSpringer
Páginas731-735
Número de páginas5
ISBN (versión impresa)9783030306472
DOI
EstadoPublicada - 2020
Evento8th Latin American Conference on Biomedical Engineering and the 42nd National Conference on Biomedical Engineering, CLAIB-CNIB 2019 - Cancún
Duración: 2 oct. 20195 oct. 2019

Serie de la publicación

NombreIFMBE Proceedings
Volumen75
ISSN (versión impresa)1680-0737
ISSN (versión digital)1433-9277

Conferencia

Conferencia8th Latin American Conference on Biomedical Engineering and the 42nd National Conference on Biomedical Engineering, CLAIB-CNIB 2019
País/TerritorioMexico
CiudadCancún
Período2/10/195/10/19

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